# Last-edition: 20060711 by ODiP

$PDBSITE_DB=$Library:[PDBSITE group:$PROTSTRUCT_LIBS
	format:$PDBSITE_FORMAT maxNameLen:32 files:{$LibFile:pdbsite}
]

$PDBSITE_FORMAT=$LibFormat:[fileType:$PDBSITE_FILE syntax:$PDBSITE_SYNTAX
fields:{

$Field:[$PDBSF_ID code:id index:id indexToken:id]
$Field:[$PDBSF_PDBID code:pdbid index:str indexToken:pdbid]
$Field:[$PDBSF_SITE_TYPE code:site_type index:str
	indexToken:site_type]
$Field:[$PDBSF_HEADER code:header index:str indexToken:header]
$Field:[$PDBSF_TITLE code:title index:str indexToken:title]
$Field:[$PDBSF_KEYWORD code:keyword index:str indexToken:keyword]
$Field:[$PDBSF_MOLECULE code:molecule index:str indexToken:molecule]

$Field:[$PDBSF_SYNONYM code:synonym index:str indexToken:synonym]
$Field:[$PDBSF_EC_NUMBER code:ec_number index:str indexToken:ec_number]
$Field:[$PDBSF_SYNTHETIC code:synthetic index:str
	indexToken:synthetic]
$Field:[$PDBSF_ORG_SCI code:org_sci index:str indexToken:org_sci]
$Field:[$PDBSF_ORG_COMMON code:org_common index:str
	indexToken:org_common]
$Field:[$PDBSF_TAXONOMY code:taxonomy index:str indexToken:taxonomy]
$Field:[$PDBSF_CELL_LOC code:cell_loc index:str indexToken:cell_loc]
$Field:[$PDBSF_STRAIN code:strain index:str indexToken:strain]
$Field:[$PDBSF_VARIANT code:variant index:str indexToken:variant]
$Field:[$PDBSF_ORGAN code:organ index:str indexToken:organ]
$Field:[$PDBSF_TISSUE code:tissue index:str indexToken:tissue]
$Field:[$PDBSF_CELL code:cell index:str indexToken:cell]
$Field:[$PDBSF_ORGANELLE code:organelle index:str indexToken:organelle]
$Field:[$PDBSF_SECRETION code:secretion index:str indexToken:secretion]
$Field:[$PDBSF_GENE code:gene index:str indexToken:gene]
$Field:[$PDBSF_GO_PROC_TERM code:go_proc_term index:str
	indexToken:go_proc_term]
$Field:[$PDBSF_GO_FUNC_TERM code:go_func_term index:str
	indexToken:go_func_term]
$Field:[$PDBSF_GO_CELL_COMP_TERM code:go_cell_comp_term index:str
	indexToken:go_cell_comp_term]

$Field:[$PDBSF_GO code:go index:str indexToken:go]
$Field:[$PDBSF_UNIPROT code:uniprot index:str indexToken:uniprot]
$Field:[$PDBSF_EMBL code:embl index:str indexToken:embl]
$Field:[$PDBSF_PIR code:pir index:str indexToken:pir]
$Field:[$PDBSF_TRANSFAC code:transfac index:str indexToken:transfac]
$Field:[$PDBSF_ENSEMBL code:ensembl index:str indexToken:ensembl]
$Field:[$PDBSF_INTERPRO code:interpro index:str indexToken:interpro]
$Field:[$PDBSF_PFAM code:pfam index:str indexToken:pfam]
$Field:[$PDBSF_SMART code:smart index:str indexToken:smart]
$Field:[$PDBSF_PANTHER code:panther index:str indexToken:panther]
$Field:[$PDBSF_PRINTS code:prints index:str indexToken:prints]
$Field:[$PDBSF_TIGR code:tigr index:str indexToken:tigr]
$Field:[$PDBSF_TIGRFAMS code:tigrfams index:str indexToken:tigrfams]
$Field:[$PDBSF_HSSP code:hssp index:str indexToken:hssp]
$Field:[$PDBSF_HAMAP code:hamap index:str indexToken:hamap]
$Field:[$PDBSF_PRODOM code:prodom index:str indexToken:prodom]
$Field:[$PDBSF_KEGG code:kegg index:str indexToken:kegg]
$Field:[$PDBSF_KEGG_COMP code:kegg_comp index:str indexToken:kegg_comp]
$Field:[$PDBSF_KEGG_DRUG code:kegg_drug index:str indexToken:kegg_drug]
$Field:[$PDBSF_PUBCHEM code:pubchem index:str indexToken:pubchem]

$Field:[$PDBSF_LIGAND code:ligand index:str indexToken:ligand]
$Field:[$PDBSF_LIGAND_FORMUL code:ligand_formul index:str 
	indexToken:ligand_formul]
$Field:[$PDBSF_DRUG code:drug index:str indexToken:drug]

$Field:[$PDBSF_MOL_CHAINS code:mol_chains index:str indexToken:mol_chains]
$Field:[$PDBSF_NUM_SITE_CHAINS code:num_site_chains index:int
	indexToken:num_site_chains]
$Field:[$PDBSF_SITE_DESCR code:site_descr index:str
	indexToken:site_descr]
$Field:[$PDBSF_RES_NOTAA code:res_notaa index:str indexToken:res_notaa]
$Field:[$PDBSF_LENSITE code:lensite index:int indexToken:lensite]
$Field:[$PDBSF_LENSURR code:lensurr index:int indexToken:lensurr]
$Field:[$PDBSF_EXPSITE code:expsite index:real indexToken:expsite]
$Field:[$PDBSF_EXPSURR code:expsurr index:real indexToken:expsurr]
$Field:[$PDBSF_DISCONT code:discont index:real indexToken:discont]
$Field:[$PDBSF_SITE_CHAINS code:site_chains index:str indexToken:site_chains]

}
]

$PDBSF_ID=$SrsField:[ID short:id group:$DF_ALL]
$PDBSF_PDBID=$SrsField:[PDBID short:pid group:$DF_ALL]
$PDBSF_SITE_TYPE=$SrsField:[SiteType short:st group:$DF_ALL]
$PDBSF_HEADER=$SrsField:[Header short:hdr group:$DF_ALL]
$PDBSF_TITLE=$SrsField:[Title short:ttl group:$DF_ALL]
$PDBSF_KEYWORD=$SrsField:[Keyword short:kw group:$DF_ALL]
$PDBSF_MOLECULE=$SrsField:[Molecule short:mol group:$DF_ALL]

$PDBSF_SYNONYM=$SrsField:[Synonym short:sy1 group:$DF_ALL]
$PDBSF_EC_NUMBER=$SrsField:[EC_Number short:ecn group:$DF_ALL]
$PDBSF_SYNTHETIC=$SrsField:[Synthetic short:sy2 group:$DF_ALL]
$PDBSF_ORG_SCI=$SrsField:[OrganismScientific short:ors group:$DF_ALL]
$PDBSF_ORG_COMMON=$SrsField:[OrganismCommon short:orc group:$DF_ALL]
$PDBSF_TAXONOMY=$SrsField:[Taxonomy short:tax group:$DF_ALL]
$PDBSF_CELL_LOC=$SrsField:[CellularLocation short:cll group:$DF_ALL]
$PDBSF_STRAIN=$SrsField:[Strain short:str group:$DF_ALL]
$PDBSF_VARIANT=$SrsField:[Variant short:vrn group:$DF_ALL]
$PDBSF_ORGAN=$SrsField:[Organ short:orn group:$DF_ALL]
$PDBSF_TISSUE=$SrsField:[Tissue short:tis group:$DF_ALL]
$PDBSF_CELL=$SrsField:[Cell short:cl group:$DF_ALL]
$PDBSF_ORGANELLE=$SrsField:[Organelle short:orl group:$DF_ALL]
$PDBSF_SECRETION=$SrsField:[Secretion short:scr group:$DF_ALL]
$PDBSF_GENE=$SrsField:[Gene short:gen group:$DF_ALL]
$PDBSF_GO_PROC_TERM=$SrsField:[GoProcessTerm short:gpt group:$DF_ALL]
$PDBSF_GO_FUNC_TERM=$SrsField:[GoFunctionTerm short:gft group:$DF_ALL]
$PDBSF_GO_CELL_COMP_TERM=$SrsField:[GoCellularComponentTerm short:gcc group:$DF_ALL]

$PDBSF_GO=$SrsField:[LinkGo short:go group:$DF_ALL]
$PDBSF_UNIPROT=$SrsField:[LinkUniprot short:unp group:$DF_ALL]
$PDBSF_EMBL=$SrsField:[LinkEmbl short:emb group:$DF_ALL]
$PDBSF_PIR=$SrsField:[LinkPir short:pir group:$DF_ALL]
$PDBSF_TRANSFAC=$SrsField:[LinkTransfac short:trn group:$DF_ALL]
$PDBSF_ENSEMBL=$SrsField:[LinkEnsembl short:ens group:$DF_ALL]
$PDBSF_INTERPRO=$SrsField:[LinkInterpro short:int group:$DF_ALL]
$PDBSF_PFAM=$SrsField:[LinkPfam short:pfm group:$DF_ALL]
$PDBSF_SMART=$SrsField:[LinkSmart short:smr group:$DF_ALL]
$PDBSF_PANTHER=$SrsField:[LinkPanther short:pnt group:$DF_ALL]
$PDBSF_PRINTS=$SrsField:[LinkPrints short:prn group:$DF_ALL]
$PDBSF_TIGR=$SrsField:[LinkTigr short:tgr group:$DF_ALL]
$PDBSF_TIGRFAMS=$SrsField:[LinkTigrfams short:tgf group:$DF_ALL]
$PDBSF_HSSP=$SrsField:[LinkHssp short:hsp group:$DF_ALL]
$PDBSF_HAMAP=$SrsField:[LinkHamap short:hmp group:$DF_ALL]
$PDBSF_PRODOM=$SrsField:[LinkProdom short:prd group:$DF_ALL]
$PDBSF_KEGG=$SrsField:[LinkKegg short:kg group:$DF_ALL]
$PDBSF_KEGG_COMP=$SrsField:[LinkKeggCompound short:kgc group:$DF_ALL]
$PDBSF_KEGG_DRUG=$SrsField:[LinkKeggDrug short:kgd group:$DF_ALL]
$PDBSF_PUBCHEM=$SrsField:[LinkPubchem short:pbc group:$DF_ALL]

$PDBSF_LIGAND=$SrsField:[Ligand short:lg group:$DF_ALL]
$PDBSF_LIGAND_FORMUL=$SrsField:[LigandFormul short:lgf group:$DF_ALL]
$PDBSF_DRUG=$SrsField:[Drug short:drg group:$DF_ALL]

$PDBSF_MOL_CHAINS=$SrsField:[MolChains short:mch group:$DF_ALL]
$PDBSF_NUM_SITE_CHAINS=$SrsField:[NumSiteChains short:nsc group:$DF_ALL]
$PDBSF_SITE_DESCR=$SrsField:[SiteDescr short:sd group:$DF_ALL]
$PDBSF_RES_NOTAA=$SrsField:[ResidueNotAA short:rna group:$DF_ALL]
$PDBSF_LENSITE=$SrsField:[LenSite short:lsi group:$DF_ALL]
$PDBSF_LENSURR=$SrsField:[LenSurround short:lsu group:$DF_ALL]
$PDBSF_EXPSITE=$SrsField:[ExposureSite short:esi group:$DF_ALL]
$PDBSF_EXPSURR=$SrsField:[ExposureSurround short:esu group:$DF_ALL]
$PDBSF_DISCONT=$SrsField:[Discontinuity short:dis group:$DF_ALL]
$PDBSF_SITE_CHAINS=$SrsField:[SiteChains short:sc group:$DF_ALL]

$Link:[$PDBSITE_DB to:$ENPDB_DB fromField:$PDBSF_PDBID toField:$ENPDBF_ID]

$PDBSITE_SYNTAX=$Syntax:[file:'SRSSITE:pdbsite.is']
$PDBSITE_FILE=$FileType:[typeName:dat maxline:5000]