Name

TRRDLCR

Status

The current release has 14 entries and was indexed 03-Nov-2015.

Description

The Transcription Regulatory Regions Database (TRRD Rel.6.x) collects information
on structural and functional organisation of transcription regulatory regions
of eukaryotic genes. The hierarchical organisation of transcription regulatory
regions of eukaryotic genomes is put into the database schema. It includes
the following information:

transcription factor binding sites
eukaryotic gene promoters, enhancers
transcription regulatory regions
gene expression regulation
corresponding bibliography references

Literature

Kolchanov NA, Ignatieva EV, Ananko EA, Podkolodnaya OA, Stepanenko IL,
Merkulova TI, Pozdnyakov MA, Podkolodny NL, Naumochkin AN, Romashchenko AG.
Transcription Regulatory Regions Database (TRRD): its status in 2002. ( in PDF )
Nucleic Acids Res., 30, 1, 312-317 [PMID: 11752324]

WWW

WWW site

Data-fields in SRS

Name	Short Name	Type	No of Keys	No of Entry References	Indexing Date	Status
gene_locus_AC gene_locus_ID annotator date_of_creation annotator_(update) date_(update) species Biological_classification chromosomal_cytological_location locus_map gene_name external_database Locus_Control_Region_AC Locus_Control_Region_ID LCR_tissue_specificity LCR_functional_group EMBL_GenBank_ID_AC functional_group_AC function Name_of_RE Synonim_of_RE_name funct_group_tissue_specificity functional_group_elements comments HS_RE_ID TRRD_accession_number_of_RE HS_RE_name HS_RE_tissue_specificity zero_point_of_HS_RE_sequence map_localization_of_HS_RE The_1st_relatively_position_of_HS last_position_of_HS_RE HS_characteristic HS_RE_sequence position_of_HS_RE_in_EMBL positive_negative_arguments organ tissue cell_type arguments authors title source year volume issue page_from page_to MEDLINE_index	id IC CR DT CU DU OS OC LO LM GI DR AL LI TL EL BI AR RF NM NY RT RE CC HI AP DE HT DP PT PS PE CD SQ PH PA OA TA CA AG AU TI SO YR VL IS PGF PGL ML	id index show show show show index show index index index index index index index index index index index index index index index show index index index index index index index index index index index index index index index index index index index index index index num num index	14 14 0 0 0 0 9 0 12 68 44 73 15 12 14 40 32 35 15 7 9 17 44 0 43 10 30 13 19 16 12 20 4 20 46 2 17 8 84 19 67 225 27 12 30 14 39 39 41	14 14 0 0 0 0 48 0 15 102 53 126 15 12 25 44 59 35 47 21 24 46 46 0 45 12 56 49 110 69 23 23 23 45 64 77 93 12 398 163 125 706 74 52 52 34 51 51 52	03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015 03-Nov-2015	ok ok not indexed not indexed not indexed not indexed ok not indexed ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok not indexed ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok ok

SRS Description

Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information

SRS 6.1.3.11 | feedback