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Name

TRRDFACTORS4

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Status The current release has 9087 entries and was indexed 03-Nov-2015.
Description The Transcription Regulatory Regions Database (TRRD Rel.6.x) collects information
on structural and functional organisation of transcription regulatory regions
of eukaryotic genes. The hierarchical organisation of transcription regulatory
regions of eukaryotic genomes is put into the database schema. It includes
the following information:
  • transcription factor binding sites
  • eukaryotic gene promoters, enhancers
  • transcription regulatory regions
  • gene expression regulation
  • corresponding bibliography references
Literature Kolchanov NA, Ignatieva EV, Ananko EA, Podkolodnaya OA, Stepanenko IL,
Merkulova TI, Pozdnyakov MA, Podkolodny NL, Naumochkin AN, Romashchenko AG.
Transcription Regulatory Regions Database (TRRD): its status in 2002. ( in PDF )
Nucleic Acids Res., 30, 1, 312-317 [PMID: 11752324]
WWW WWW site
Data-fields in SRS
Name Short Name Type No of Keys No of Entry References Indexing Date Status
Identifier
GeneID
SiteAC
FactorName
FactorSubunitName
FactorNameSynonym
FactorOrigin
TRANSFAC_link
FactorSource
Organ
StageOrgDev
Tissue
Cells
IndReprName
Reference
Comments
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9087
1448
5254
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408
927
66
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42
13
594
242
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9087
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9087
4401
4366
7872
4224
9473
608
195
49
5952
1703
0
0
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Links
From Databank Entries Linked To Databank Entries Linked Links Total Indexing Date
TRRDGENES4 1448 TRRDFACTORS4 9087 9087 03-Nov-2015
TRRDSITES4 5254 TRRDFACTORS4 9087 423471 03-Nov-2015
TRRDFACTORS4 9087 TRRDSITES4 5254 599299 03-Nov-2015
TRRDFACTORS4 9087 TRRDGENES4 1448 9087 03-Nov-2015
TRRDFACTORS4 7907 TRRDEXP4 9690 103188 03-Nov-2015
TRRDFACTORS4 9087 TRRDBIB4 5982 72911 03-Nov-2015
TRRDEXP4 9690 TRRDFACTORS4 7907 103188 03-Nov-2015
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
SRS 6.1.3.11 |  feedback