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Name

TRRDBIB4

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Status The current release has 7609 entries and was indexed 03-Nov-2015.
Description The Transcription Regulatory Regions Database (TRRD Rel.6.x) collects information
on structural and functional organisation of transcription regulatory regions
of eukaryotic genes. The hierarchical organisation of transcription regulatory
regions of eukaryotic genomes is put into the database schema. It includes
the following information:
  • transcription factor binding sites
  • eukaryotic gene promoters, enhancers
  • transcription regulatory regions
  • gene expression regulation
  • corresponding bibliography references
Literature Kolchanov NA, Ignatieva EV, Ananko EA, Podkolodnaya OA, Stepanenko IL,
Merkulova TI, Pozdnyakov MA, Podkolodny NL, Naumochkin AN, Romashchenko AG.
Transcription Regulatory Regions Database (TRRD): its status in 2002. ( in PDF )
Nucleic Acids Res., 30, 1, 312-317 [PMID: 11752324]
WWW WWW site
Data-fields in SRS
Name Short Name Type No of Keys No of Entry References Indexing Date Status
ReferenceId
GeneID
Authors
ArticleInd
ArticleDescr
Title
Journal
Volume
Year
Pages
MEDLINE_link
MEDLINE_link
id
gid
AU
AI
AD
TI
SO
VL
YR
PG
ML
ML
id
index
index
index
index
index
index
index
num
index
index
index
7609
2344
17946
2
3
10181
283
468
35
5927
216
216
7609
7609
36309
1617
1585
101259
7773
7773
7773
7773
301
301
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
03-Nov-2015
ok
ok
ok
ok
ok
ok
ok
ok
ok
ok
ok
ok
Links
From Databank Entries Linked To Databank Entries Linked Links Total Indexing Date
TRRDGENES4 2344 TRRDBIB4 7609 7609 03-Nov-2015
TRRDSITES4 10135 TRRDBIB4 6997 66540 03-Nov-2015
TRRDBIB4 7609 TRRDGENES4 2344 7609 03-Nov-2015
TRRDFACTORS4 9087 TRRDBIB4 5982 72911 03-Nov-2015
TRRDEXP4 14407 TRRDBIB4 6816 131352 03-Nov-2015
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
SRS 6.1.3.11 |  feedback